BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D08SP1|AL428720
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1063 1689 0.0
>3x_Contig1063
Length = 5012
Score = 1689 bits (850), Expect = 0.0
Identities = 860/864 (99%), Gaps = 1/864 (0%)
Strand = Plus / Plus
Query: 1 aaatgctcttcaagtcgttattaattcggaattaaaatacaaaaatggcgtatcctgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2148 aaatgctcttcaagtcgttattaattcggaattaaaatacaaaaatggcgtatcctgcat 2207
Query: 61 atttaaacaaaacatagaacggtcgatgcagcgctcaaaaatgtaacaaaggagaaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2208 atttaaacaaaacatagaacggtcgatgcagcgctcaaaaatgtaacaaaggagaaaaca 2267
Query: 121 gcagagagtatgtcgtgccacaaattttttacggaatgctaactagagattaaatggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2268 gcagagagtatgtcgtgccacaaattttttacggaatgctaactagagattaaatggtga 2327
Query: 181 tagtattcctagatttacttatgttgaccgtcaaaaacctcaattaactaaaggaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2328 tagtattcctagatttacttatgttgaccgtcaaaaacctcaattaactaaaggaaagct 2387
Query: 241 cgttttttgctttaaataggaaatgttttccacggaagtctaaaaaagttgtagtattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2388 cgttttttgctttaaataggaaatgttttccacggaagtctaaaaaagttgtagtattct 2447
Query: 301 ttaataaatttcaaaaagatgaggaagatcatgatcttcgagattttgtttgttgccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2448 ttaataaatttcaaaaagatgaggaagatcatgatcttcgagattttgtttgttgccttc 2507
Query: 361 tcgataccatcaaagaacagtattagaggtgaacacctgamagctcagaagccacgtaat 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2508 tcgataccatcaaagaacagtattagaggtgaacacctgaaagctcagaagccacgtaat 2567
Query: 421 agtcaaaacatcataattcagaaactaaggaggttgaatatcaagtttgatagattgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2568 agtcaaaacatcataattcagaaactaaggaggttgaatatcaagtttgatagattgaat 2627
Query: 481 tcactttcaaatctccagaaattgaccgccaatgactatatgtttctttattcgatgcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2628 tcactttcaaatctccagaaattgaccgccaatgactatatgtttctttattcgatgcct 2687
Query: 541 tcaggaatgagtcggtattcattgaggcagtgtcgcaactctggtcacgttttttctaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2688 tcaggaatgagtcggtattcattgaggcagtgtcgcaactctggtcacgttttttctaca 2747
Query: 601 acaatcaggtaccaattttgtgaaaaaaaactgaaactttatgcatttaggcagtagaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2748 acaatcaggtaccaattttgtgaaaaaaaactgaaactttatgcatttaggcagtagaca 2807
Query: 661 tggtaagttaatgaaatatgagatgagatcagtttatagagaatgagggagctatgamam 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2808 tggtaagttaatgaaatatgagatgagatcagtttatagagaatgagggagctatgaaaa 2867
Query: 721 agaacttaagctatataaccattggtatctcaaccgtttcagcgtactctgctcggtaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2868 agaacttaagctatataaccattggtatctcaaccgtttcagcgtactctgctcggtaga 2927
Query: 781 tattattttgagagattctaaatatcaggccaagcaatcgggttaccatcatgtctgcga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2928 tattattttgagagattctaaatatcaggccaagcaatcgggttaccatcatgtctgcga 2987
Query: 841 aa-ctgcaggaaaagttgagaatg 863
|| |||||||||||||||||||||
Sbjct: 2988 aagctgcaggaaaagttgagaatg 3011
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7305
Number of Sequences: 1807
Number of extensions: 7305
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)